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1.
Chem Sci ; 15(4): 1409-1417, 2024 Jan 24.
Artigo em Inglês | MEDLINE | ID: mdl-38274083

RESUMO

Metal-metal cooperation for inert bond activation is a ubiquitous concept in coordination chemistry and catalysis. While the great majority of such transformations proceed via intramolecular mode in binuclear complexes, to date only a few examples of intermolecular small molecule activation using usually bimetallic frustrated Lewis pairs (Mδ+⋯M'δ-) have been reported. We introduce herein an alternative approach for the intermolecular bimetallic cooperativity observed in the catalytic dehydrogenation of amine-boranes, in which the concomitant activation of N-H and B-H bonds of the substrate via the synergetic action of Lewis acidic (M+) and basic hydride (M-H) metal species derived from the same mononuclear complex (M-Br). It was also demonstrated that this system generated in situ from the air-stable Mn(i) complex fac-[(CO)3(bis(NHC))MnBr] and NaBPh4 shows high activity for H2 production from several substrates (Me2NHBH3, tBuNH2BH3, MeNH2BH3, NH3BH3) at low catalyst loading (0.1% to 50 ppm), providing outstanding efficiency for Me2NHBH3 (TON up to 18 200) that is largely superior to all known 3d-, s-, p-, f-block metal derivatives and frustrated Lewis pairs (FLPs). These results represent a step forward towards more extensive use of intermolecular bimetallic cooperation concepts in modern homogeneous catalysis.

2.
Molecules ; 28(8)2023 Apr 11.
Artigo em Inglês | MEDLINE | ID: mdl-37110601

RESUMO

Acid-base characteristics (acidity, pKa, and hydricity, ΔG°H- or kH-) of metal hydride complexes could be a helpful value for forecasting their activity in various catalytic reactions. Polarity of the M-H bond may change radically at the stage of formation of a non-covalent adduct with an acidic/basic partner. This stage is responsible for subsequent hydrogen ion (hydride or proton) transfer. Here, the reaction of tricarbonyl manganese hydrides mer,trans-[L2Mn(CO)3H] (1; L = P(OPh)3, 2; L = PPh3) and fac-[(L-L')Mn(CO)3H] (3, L-L' = Ph2PCH2PPh2 (dppm); 4, L-L' = Ph2PCH2-NHC) with organic bases and Lewis acid (B(C6F5)3) was explored by spectroscopic (IR, NMR) methods to find the conditions for the Mn-H bond repolarization. Complex 1, bearing phosphite ligands, features acidic properties (pKa 21.3) but can serve also as a hydride donor (ΔG≠298K = 19.8 kcal/mol). Complex 3 with pronounced hydride character can be deprotonated with KHMDS at the CH2-bridge position in THF and at the Mn-H position in MeCN. The kinetic hydricity of manganese complexes 1-4 increases in the order mer,trans-[(P(OPh)3)2Mn(CO)3H] (1) < mer,trans-[(PPh3)2Mn(CO)3H] (2) ≈ fac-[(dppm)Mn(CO)3H] (3) < fac-[(Ph2PCH2NHC)Mn(CO)3H] (4), corresponding to the gain of the phosphorus ligand electron-donor properties.

3.
Inorg Chem ; 61(40): 16081-16092, 2022 Oct 10.
Artigo em Inglês | MEDLINE | ID: mdl-36149890

RESUMO

Novel 18e̅ and 16e̅ pentamethylcyclopentadienyl rhodium(III) complexes [(η5-C5Me5)RhX(NPN)] (1a,b, X = Cl; 2a-c, X = PF6, BAr4F) with chelating zwitterionic iminophosphonamide (NPN) ligands (Ph2P(NR)(NR'); a, R = R' = p-Tol; b, R = p-Tol, R' = Me; c, R = R' = Me) were synthesized and characterized by single-crystal X-ray diffraction. In the 16e̅ complexes 2, the rhodium (Rh) atom is efficiently stabilized by π-donation of unshared N electrons, thus hampering coordination of the external ligands and rendering the 18e̅ complexes labile. Due to low coordination enthalpy, the cationic 18e̅ monocarbonyl and pyridine adducts 2a·L are stable only at low temperatures. At room temperature, 2·CO adducts readily give stable carbonyl-carbamoyl complexes [(η5-C5Me5)Rh(CO){(CO(NR')Ph2P(NR)}]+ (4) formed as a result of CO insertion into the Rh-N bond, thus showing high nucleophilicity of the N atoms in 18e̅ complexes. High basicity of the Na+NPN- precursors caused side deprotonation of the η5-C5Me5 ligand during the synthesis of 1 that yields unstable fulvene Rh(I) complexes [(η4-C5Me4CH2)Rh{Ph2P(NR)(NR')2}] (3a,b). Complex 3a undergoes a facile reaction with isoprene to yield an unusual [(η5:η1-C5Me4(CH2)C(Me)═CHCH2)Rh(NPN)] complex─the first example of intermolecular 1,4-metallacycloaddition of diene to the Rh-fulvene complex.

4.
Chem Commun (Camb) ; 58(32): 5017-5020, 2022 Apr 19.
Artigo em Inglês | MEDLINE | ID: mdl-35373227

RESUMO

Low-temperature IR and NMR studies combined with DFT calculations revealed the mechanistic complexity of apparently simple reactions between Mn(I) complex fac-[(dppm)Mn(CO)3H] and Lewis acids (LA = Ph3C+, B(C6F5)3) involving the formation of so-far elusive meridional hydride species mer-[(dppm)Mn(CO)3H⋯LA] and unusual dearomatization of the Ph3C+ cation upon hydride transfer.

5.
Dalton Trans ; 51(11): 4354-4365, 2022 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-35191435

RESUMO

Indolyl fragment containing phenanthroline based new ligands and their corresponding Ru(II) complexes were synthesized and fully characterized by various spectroscopic techniques. The catalytic activity of these newly synthesized cyclometalated (NNC)Ru(II) complexes was explored towards the ß-methylation of alcohols using methanol. Notably, these complexes displayed superior reactivity compared to various (NNN)Ru(II) complexes. Utilizing this strategy, a wide range of primary, secondary, and aliphatic straight chain alcohols were selectively methylated. This protocol was further employed for the methylation of a few natural products and the gram scale synthesis of ß-methylated alcohols. A series of control experiments and kinetic studies were performed to understand the plausible reaction mechanism.

6.
Diagnostics (Basel) ; 13(1)2022 Dec 22.
Artigo em Inglês | MEDLINE | ID: mdl-36611327

RESUMO

Androgen assessment is a key element for diagnosing polycystic ovary syndrome (PCOS), and defining a "normal" level of circulating androgens is critical for epidemiological studies. We determined the upper normal limits (UNLs) for androgens in a population-based group of premenopausal "healthy control" women, overall and by ethnicity (Caucasian and Asian), in the cross-sectional Eastern Siberia PCOS Epidemiology and Phenotype (ESPEP) Study (ClinicalTrials.gov ID: NCT05194384) conducted in 2016-2019. Overall, we identified a "healthy control" group consisting of 143 healthy premenopausal women without menstrual dysfunction, hirsutism, polycystic ovaries, or medical disorders. We analyzed serum total testosterone (TT) by using liquid chromatography with tandem mass spectrometry (LC-MS/MS), and DHEAS, sex-hormone-binding globulin (SHBG), TSH, prolactin, and 17-hydroxyprogesterone (17OHP) were assessed with an enzyme-linked immunosorbent assay (ELISA). The UNLs for the entire population for the TT, free androgen index (FAI), and DHEAS were determined as the 98th percentiles in healthy controls as follows: 67.3 (95% confidence interval (CI): 48.1, 76.5) ng/dl, 5.4 (3.5, 14.0), and 355 (289, 371) µg/dl, respectively. The study results demonstrated that the UNLs for TT and FAI varied by ethnicity, whereas the DHEAS UNLs were comparable in the ethnicities studied.

7.
Life (Basel) ; 13(1)2022 Dec 20.
Artigo em Inglês | MEDLINE | ID: mdl-36675956

RESUMO

Abnormalities in gut microbiota diversity are considered important mechanisms in metabolic disorders in polycystic ovarian syndrome (PCOS). However, the data on the association of these disorders with the PCOS phenotype remain controversial. The objectives of this study were to estimate the alpha diversity of the gut microbiota of healthy women and PCOS patients depending on phenotype. The study participants (184 premenopausal women: 63 with PCOS, 121 without PCOS) were recruited during the annual employment assessment in the Irkutsk Region and the Buryat Republic (Russia) in 2016-2019. For PCOS diagnosis, we used the Rotterdam (2003) criteria and definitions of PCOS phenotypes. Five indexes of alpha diversity (ASV, Shannon, Simpson, Chao, and ACE) were estimated for the gut microbiota in all participants using amplicon metasequencing. As a result, two out of five alpha diversity indexes showed a statistical difference between the non-PCOS and PCOS groups. We did not find a significant difference in the alpha diversity of gut microbiota in the subgroups of women with hyperandrogenic PCOS phenotypes vs non-androgenic phenotype D and the group of women with the presence of only one of the PCOS criteria. Nevertheless, "classic" PCOS phenotypes demonstrated the most significant decrease in alpha diversity compared with healthy women without any signs of PCOS.

8.
Chem Commun (Camb) ; 58(6): 859-862, 2022 Jan 18.
Artigo em Inglês | MEDLINE | ID: mdl-34935012

RESUMO

The catalytic activity in amine-borane dehydrogenation is shown for the first time for Ln(II) species using complexes [{(p-tBu-C6H4)2CH}2M·L] (M = Yb, Sm, L = (DME)2, TMEDA). The protonation of M(II)-C bonds with HNR1R2BH3 affords amidoborane complexes [M(NR1R2BH3)2L], which under excess HNMe2BH3 transform to [NMe2BH2NMe2BH3]- derivatives, both serving as the dehydrocoupling intermediates.

9.
Molecules ; 26(12)2021 Jun 20.
Artigo em Inglês | MEDLINE | ID: mdl-34202981

RESUMO

The mechanism of the consecutive halogenation of the tetrahydroborate anion [BH4]- by hydrogen halides (HX, X = F, Cl, Br) and hexahydro-closo-hexaborate dianion [B6H6]2- by HCl via electrophile-induced nucleophilic substitution (EINS) was established by ab initio DFT calculations [M06/6-311++G(d,p) and wB97XD/6-311++G(d,p)] in acetonitrile (MeCN), taking into account non-specific solvent effects (SMD model). Successive substitution of H- by X- resulted in increased electron deficiency of borohydrides and changes in the character of boron atoms from nucleophilic to highly electrophilic. This, in turn, increased the tendency of the B-H bond to transfer a proton rather than a hydride ion. Thus, the regularities established suggested that it should be possible to carry out halogenation more selectively with the targeted synthesis of halogen derivatives with a low degree of substitution, by stabilization of H2 complex, or by carrying out a nucleophilic substitution of B-H bonds activated by interaction with Lewis acids (BL3).

10.
Mar Biotechnol (NY) ; 23(3): 463-471, 2021 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-34076776

RESUMO

Studies of invertebrates have shown that the internal environment of crustaceans is not always sterile in normal conditions, and in many species, it can be populated by microorganisms even in the absence of any visible pathological processes in the body. This observation raises the question of whether genetically modified indigenous hemolymph microorganisms can be used for biotechnological purposes inside the crustacean either as local producers of some compounds or as sensors to physiological parameters. In this study, we tested the ability of the bacteria isolated from the hemolymph of the amphipod Eulimnogammarus verrucosus to hide from the cellular immune response of the host as the most important feature for their potential long-term application in vivo. 16S rDNA amplicon sequencing revealed five common bacterial genera in all analyzed samples of the amphipod hemolymph, among which Pseudomonas is most easily subjected to genome modification and, thus, the most prospective for biotechnological application. Cultivation of Pseudomonas gave us a number of strains undoubtedly derived from the amphipod hemolymph, and one of them (belonging to the Pseudomonas fluorescens group) was chosen for further tests. The primary culture of amphipod hemocytes was used to analyze the immunogenicity of the strain and showed a pronounced reaction of the immune cells to a high amount of the bacteria within six hours. This result indicates that modulation of cellular immune response to metabolically active bacterial cells is not mandatory for the survival and wide distribution of these microorganisms in the hemolymph of numerous amphipod individuals.


Assuntos
Anfípodes/imunologia , Anfípodes/microbiologia , Imunidade Celular , Pseudomonas/fisiologia , Animais , Hemócitos , Hemolinfa/citologia , Hemolinfa/microbiologia , Lagos , Sibéria
11.
Chem Sci ; 12(10): 3682-3692, 2021 Jan 15.
Artigo em Inglês | MEDLINE | ID: mdl-34163642

RESUMO

The reaction between basic [(PCP)Pd(H)] (PCP = 2,6-(CH2P(t-C4H9)2)2C6H4) and acidic [LWH(CO)3] (L = Cp (1a), Tp (1b); Cp = η5-cyclopentadienyl, Tp = κ3-hydridotris(pyrazolyl)borate) leads to the formation of bimolecular complexes [LW(CO)2(µ-CO)⋯Pd(PCP)] (4a, 4b), which catalyze amine-borane (Me2NHBH3, t BuNH2BH3) dehydrogenation. The combination of variable-temperature (1H, 31P{1H}, 11B NMR and IR) spectroscopies and computational (ωB97XD/def2-TZVP) studies reveal the formation of an η1-borane complex [(PCP)Pd(Me2NHBH3)]+[LW(CO3)]- (5) in the first step, where a BH bond strongly binds palladium and an amine group is hydrogen-bonded to tungsten. The subsequent intracomplex proton transfer is the rate-determining step, followed by an almost barrierless hydride transfer. Bimetallic species 4 are easily regenerated through hydrogen evolution in the reaction between two hydrides.

12.
Data Brief ; 32: 106137, 2020 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-32939371

RESUMO

For the metagenomic characterization of potential taxonomic and functional diversity of microorganisms associated with polycystic ovary syndrome (PCOS) in women, we surveyed five women with PCOS and collected samples of feces, saliva, and serum. After quality processing, we have obtained from 915,594 to 3,880,379 reads; these 16,693 sequences had ribosomal RNA genes, 2,091,990 sequences contained predicted proteins with known functions, and 3,750,261 sequences had predicted proteins with unknown functions. Host DNA accounted for ca. 0.03% and less in datasets of fecal samples, from 1.41 to 24.94% in saliva samples; the remaining sequences were attributed to archaeal, bacterial, or viral DNA. In serum, from 38.18 to 75.77% were characterized as fragments of the human genome, but the remaining sequences were unidentified. Among microbes, a total of one archaeal and eight bacterial phyla were revealed. Viral DNA was detected in several fecal and one saliva sample and was classified as C2likevirus, Flavivirus, and Streptococcus bacteriophage. The metagenome sequence data were deposited at NCBI SRA as BioProject No. PRJNA625611.

13.
Data Brief ; 32: 106141, 2020 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-32939372

RESUMO

Childhood obesity and its consequences are a significant public health problem worldwide. Gut microbiota has a potential role in the development of. In the current datasets, we present 16S rDNA amplicon metasequencing of the gut microbiome of adolescents with normal weight, obesity, and obesity with irritable bowel syndrome (IBS) carried out using the Illumine platform. The datasets presented in this report are partly shown in the research article named "Composition and Structure of Gut Microbiome in Adolescents with Obesity and Different Breastfeeding Duration" [1]. The amplicon metasequencing data were deposited at NCBI SRA as BioProject PRJNA604466. A total of 22 phyla, 34 classes, and 231 genera were revealed. Three groups of adolescents had 196 core amplicon sequence variant (ASV), whereas 45, 24, and 1 ASV were unique for adolescents with normal body weight, obesity, and obesity with IBS, respectively. The metagenomic data were first obtained for adolescents from Eastern Siberian, Russia. They have the potential for predictive analysis, which is crucial for understanding microbial community dynamics and their role in the development of the intestinal microbiome. Considering the recent focus on gut microbiota, new datasets are needed to determine the association between gut microbes and the weight of adolescents from previously unexplored regions such as Siberia, Russia.

14.
Inorg Chem ; 59(17): 12240-12251, 2020 Sep 08.
Artigo em Inglês | MEDLINE | ID: mdl-32805120

RESUMO

The activation of silanes in dehydrogenative coupling with alcohols under general base catalysis was studied experimentally (using multinuclear NMR, IR, and UV-visible spectroscopies) and computationally (at DFT M06/6-311++G(d,p) theory level) on the example of Ph4-nSiHn (n = 1-3) interaction with (CF3)2CHOH in the presence of Et3N. The effect of the phenyl groups' number and H- substitution by the electron-withdrawing (CF3)2CHO- group on Si-H bond hydricity (quantified as hydride-donating ability, HDA) and Lewis acidity of silicon atom (characterized by maxima of molecular electrostatic potential) was accessed. Our results show the coordination of Lewis base (Y = Me3N, ROH, OR-) leads to the increased hydricity of pentacoordinate hypervalent Ph4-nSi(Y)Hn complexes and a decrease of the reaction barrier for H2 release. The formation of tertiary complexes [Ph4-nSi(Y)Hn]···HOR is a critical prerequisite for the dehydrocoupling with alkoxides being ideal activators. The latter can be external or internal, generated by in situ HOR deprotonation. The mutual effect of tetrel interaction and dihydrogen bonding in tertiary complexes (RO-)Ph4-nSiHn···HOR leads to dichotomous activation of Si-H bond promoting the proton-hydride transfer and H2 release.

15.
Inorg Chem ; 59(17): 11962-11975, 2020 Sep 08.
Artigo em Inglês | MEDLINE | ID: mdl-32806008

RESUMO

Two stereoisomers of pentacoordinate iridium(III) hydridochloride with triptycene-based PC(sp3)P pincer ligand (1,8-bis(diisopropylphosphino)triptycene), 1 and 2, differ by the orientation of hydride ligand relative to the bridgehead ring of triptycene. According to DFT/B3PW91/def2-TZVP calculations performed, an equatorial Cl ligand can relatively easily change its position in 1, whereas that is not the case in 2. Both complexes 1 and 2 readily bind the sixth ligand to protect the empty coordination site. Variable temperature spectroscopic (NMR, IR, and UV-visible) studies show the existence of two isomers of hexacoordinate complexes 1·MeCN, 2·MeCN, and 2·Py with acetonitrile or pyridine coordinated trans to hydride or trans to metalated C(sp3), whereas only the equatorial isomer is found for 1·Py. These complexes are stabilized by various intramolecular noncovalent C-H···Cl interactions that are affected by the rotation of isopropyls or pyridine. The substitution of MeCN by pyridine is slow yielding axial Py complexes as kinetic products and the equatorial Py complexes as thermodynamic products with faster reactions of 1·L. Ultimately, that explains the higher activity of 1 in the catalytic alkenes' isomerization observed for allylbenzene, 1-octene, and pent-4-enenitrile, which proceeds as an insertion/elimination sequence rather than through the allylic mechanism.

16.
Molecules ; 25(12)2020 Jun 25.
Artigo em Inglês | MEDLINE | ID: mdl-32630429

RESUMO

Thermodynamic hydricity (HDAMeCN) determined as Gibbs free energy (ΔG°[H]-) of the H- detachment reaction in acetonitrile (MeCN) was assessed for 144 small borane clusters (up to 5 boron atoms), polyhedral closo-boranes dianions [BnHn]2-, and their lithium salts Li2[BnHn] (n = 5-17) by DFT method [M06/6-311++G(d,p)] taking into account non-specific solvent effect (SMD model). Thermodynamic hydricity values of diborane B2H6 (HDAMeCN = 82.1 kcal/mol) and its dianion [B2H6]2- (HDAMeCN = 40.9 kcal/mol for Li2[B2H6]) can be selected as border points for the range of borane clusters' reactivity. Borane clusters with HDAMeCN below 41 kcal/mol are strong hydride donors capable of reducing CO2 (HDAMeCN = 44 kcal/mol for HCO2-), whereas those with HDAMeCN over 82 kcal/mol, predominately neutral boranes, are weak hydride donors and less prone to hydride transfer than to proton transfer (e.g., B2H6, B4H10, B5H11, etc.). The HDAMeCN values of closo-boranes are found to directly depend on the coordination number of the boron atom from which hydride detachment and stabilization of quasi-borinium cation takes place. In general, the larger the coordination number (CN) of a boron atom, the lower the value of HDAMeCN.


Assuntos
Acetonitrilas/química , Boranos/química , Hidrogênio/química , Teoria Quântica , Termodinâmica
17.
Molecules ; 25(9)2020 May 09.
Artigo em Inglês | MEDLINE | ID: mdl-32397552

RESUMO

Ruthenocene-based PCPtBu pincer ligands were used to synthesize novel pincer palladium chloride RcF[PCPtBu]PdCl (2a) and two novel palladium tetrahydroborates RcF[PCPtBu]Pd(BH4) (3a) and Rc*[PCPtBu]Pd(BH4) (3b), where RcF[PCPtBu] = κ3-{2,5-(tBu2PCH2)2-C5H2}Ru(CpF) (CpF = C5Me4CF3), and Rc*[PCPtBu] = κ3-{2,5-(tBu2PCH2)2C5H2}Ru(Cp*) (Cp* = C5Me5). These coordination compounds were characterized by X-ray, NMR and FTIR techniques. Analysis of the X-ray data shows that an increase of the steric bulk of non-metalated cyclopentadienyl ring in 3a and 3b relative to non-substituted Rc[PCPtBu]Pd(BH4) analogue (3c; where Rc[PCPtBu] = κ3-{2,5-(tBu2PCH2)2C5H2}Ru(Cp), Cp = C5H5) pushes palladium atom from the middle plane of the metalated Cp ring in the direction opposite to the ruthenium atom. This displacement increases in the order 3c < 3b < 3a following the order of the Cp-ring steric volume increase. The analysis of both X-ray and IR data suggests that BH4 ligand in both palladium tetrahydroborates 3a and 3b has the mixed coordination mode η1,2. The strength of the BH4 bond with palladium atom increases in the order Rc[PCPtBu]Pd(BH4) < Rc*[PCPtBu]Pd(BH4) < RcF[PCPtBu]Pd(BH4) that appears to be affected by both steric and electronic properties of the ruthenocene moiety.


Assuntos
Boroidretos/química , Compostos Organometálicos/química , Paládio/química , Cristalografia por Raios X , Espectroscopia de Ressonância Magnética , Estrutura Molecular , Espectroscopia de Infravermelho com Transformada de Fourier
18.
Dalton Trans ; 49(5): 1473-1484, 2020 Feb 07.
Artigo em Inglês | MEDLINE | ID: mdl-31916565

RESUMO

A series of arene ruthenium iminophosphonamide complexes, [(Arene)RuCl{R2P(NR')2}] (1), bearing various arenes and R,R' substituents on the NPN ligand have been investigated as precatalysts in acetophenone transfer hydrogenation in basic and base-free isopropanol. The results clearly demonstrate the presence of two distinct reaction mechanisms, which are controlled by the basicity of the N-atoms. Complexes 1 in which both R' substituents are aryl groups are only active once the neutral hydride complex [(Arene)RuH{R2P(NR')2}] (2) is generated in basic isopropanol, the latter being able to reduce a ketone via a stepwise hydride and proton transfer. On the other hand, complexes in which at least one R' group is Me readily catalyze the reaction in the absence of base. In the latter case, the results of kinetic studies and DFT calculations support an outer-sphere concerted asynchronous hydride and proton transfer assisted by the basic N-atom of the NPN ligand, which promotes catalysis via precoordination of an alcohol molecule by hydrogen bonding.

19.
Infect Genet Evol ; 77: 104057, 2020 01.
Artigo em Inglês | MEDLINE | ID: mdl-31629083

RESUMO

The existence of "transrenal" DNA (tr-DNA), i.e. cell-free DNA that has distributed through the renal barrier to the urine, was first shown from a pathogen in 2000 (Botezatu et al., 2000). However, a targeted search for tr-DNA from Mycobacterium tuberculosis (MBT) started relatively recently (Cannas et al., 2008; Green et al., 2009). While other MBT cellular components found in the urine, e.g. lipoarabinomannan, have been used as an enhanced diagnostic tool, tr-DNA has the potential for strain specific identification or a more persistent biomarker during treatment of active disease. We therefore sought to identify by high-throughput next generation sequencing (NGS) MBT genome fragments in the urine of people with human immunodeficiency virus and tuberculosis (HIV-TB) co-infection living in a co-epidemic setting, and to evaluate whether these DNA targets are suitable for the development a quantitative TaqMan polymerase chain reaction with real-time detection (rt-PCR). Selection and mapping to the reference MBT genome of strain H37Rv (NC_000962) revealed 158 fragments of mycobacterial DNA with length from 19 to 44 base pairs (bp) repeated in different DNA samples. Five targets were chosen for design of rt-PCR primers and probes. Comparative analysis of the newly developed tests that were based on the results of NGS did not reveal a significant increase in sensitivity and specificity relative to the previous empirically designed targets. Howver, highly reproducible NGS reads of mycobacterial tr-DNA were obtained. rt-PCR test development suitable for more practical clinical use was likely limited by the small size of the secreted DNA fragments. It is necessary to develop further molecular approaches for the detection of mycobacterial tr-DNA or rely on NGS techniques with inherent bioinformatics requirements.


Assuntos
Infecções por HIV/microbiologia , Metagenômica/métodos , Mycobacterium tuberculosis/genética , Tuberculose/urina , Coinfecção/microbiologia , Coinfecção/urina , Primers do DNA/genética , DNA Bacteriano/urina , Evolução Molecular , Infecções por HIV/urina , Sequenciamento de Nucleotídeos em Larga Escala/métodos , Humanos , Mycobacterium tuberculosis/isolamento & purificação , Filogenia , Sensibilidade e Especificidade , Análise de Sequência de DNA , Tuberculose/microbiologia
20.
Dalton Trans ; 48(33): 12720-12729, 2019 Sep 07.
Artigo em Inglês | MEDLINE | ID: mdl-31389460

RESUMO

Two novel ruthenocene-based pincer palladium tetrahydroborates were characterized by XRD, NMR and FTIR. The alcoholysis of Pd(ii) tetrahydroborate LPd(BH4) (L = κ3-[{2,5-(tBu2PCH2)2C5H2}Ru(C5H5)]) yields the dinuclear cationic Pd(ii) tetrahydroborate with the bridging BH4- ligand [(LPd)2(µ,η1,2:η1,2-BH4)]+. The bifurcate dihydrogen-bonded complexes are the active intermediates of the first proton transfer in the step-wise alcoholysis of LPd(BH4), yielding eventually [(LPd)2(µ,η1,2:η1,2-BH4)]+. According to the X-ray and DFT/M06 geometry analysis, the BH4- ligand in both palladium tetrahydroborates has a mixed coordination mode η1,2. The possibility of BH3-group abstraction from LPd(BH4) by an excess of organic base (THF, Py) with the formation of hydride LPdIIH is shown. This Pd(ii) hydride is a very reactive compound able to rapidly capture CO2 (ca. 15 min) converting into the formate complex LPdII(η1-OC(O)H). The hydrolysis of LPdH with subsequent CO2 insertion yields a hydrocarbonate complex LPdII(η1-OC(O)OH). The hydrocarbonate complex forms hydrogen-bonded dimers in the crystal due to hydrogen bonds between the OC(O)OH fragments.

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